This is the complete list of members for AASequence, including all inherited members.
| AASequence() | AASequence | |
| AASequence(const AASequence &rhs) | AASequence | |
| AASequence(const String &rhs) | AASequence | |
| AASequence(const char *rhs) | AASequence | |
| begin() | AASequence | inline |
| begin() const | AASequence | inline |
| c_term_mod_ | AASequence | protected |
| empty() const | AASequence | |
| end() | AASequence | inline |
| end() const | AASequence | inline |
| getAAFrequencies(Map< String, Size > &frequency_table) const | AASequence | |
| getAverageWeight(Residue::ResidueType type=Residue::Full, Int charge=0) const | AASequence | |
| getCTerminalModification() const | AASequence | |
| getFormula(Residue::ResidueType type=Residue::Full, Int charge=0) const | AASequence | |
| getMonoWeight(Residue::ResidueType type=Residue::Full, Int charge=0) const | AASequence | |
| getNTerminalModification() const | AASequence | |
| getNumberOf(const String &residue) const | AASequence | |
| getPrefix(Size index) const | AASequence | |
| getResidue(SignedSize index) const | AASequence | |
| getResidue(Size index) const | AASequence | |
| getResidueDB_() const | AASequence | protected |
| getSubsequence(Size index, UInt number) const | AASequence | |
| getSuffix(Size index) const | AASequence | |
| has(const Residue &residue) const | AASequence | |
| has(const String &name) const | AASequence | |
| hasCTerminalModification() const | AASequence | |
| hasNTerminalModification() const | AASequence | |
| hasPrefix(const AASequence &peptide) const | AASequence | |
| hasPrefix(const String &peptide) const | AASequence | |
| hasSubsequence(const AASequence &peptide) const | AASequence | |
| hasSubsequence(const String &peptide) const | AASequence | |
| hasSuffix(const AASequence &peptide) const | AASequence | |
| hasSuffix(const String &peptide) const | AASequence | |
| isModified() const | AASequence | |
| isModified(Size index) const | AASequence | |
| isValid() const | AASequence | |
| n_term_mod_ | AASequence | protected |
| operator!=(const AASequence &rhs) const | AASequence | |
| operator!=(const String &rhs) const | AASequence | |
| operator!=(const char *rhs) const | AASequence | |
| operator+(const AASequence &peptide) const | AASequence | |
| operator+(const String &peptide) const | AASequence | |
| operator+(const char *rhs) const | AASequence | |
| operator+(const Residue *residue) const | AASequence | |
| operator+=(const AASequence &) | AASequence | |
| operator+=(const String &) | AASequence | |
| operator+=(const char *rhs) | AASequence | |
| operator+=(const Residue *residue) | AASequence | |
| operator<(const AASequence &rhs) const | AASequence | |
| operator<<(std::ostream &os, const AASequence &peptide) | AASequence | friend |
| operator=(const AASequence &rhs) | AASequence | |
| operator==(const AASequence &rhs) const | AASequence | |
| operator==(const String &rhs) const | AASequence | |
| operator==(const char *rhs) const | AASequence | |
| operator>>(std::istream &is, const AASequence &peptide) | AASequence | friend |
| operator[](SignedSize index) const | AASequence | |
| operator[](Size index) const | AASequence | |
| parseString_(std::vector< const Residue * > &sequence, const String &peptide) | AASequence | protected |
| peptide_ | AASequence | protected |
| sequence_string_ | AASequence | protected |
| setCTerminalModification(const String &modification) | AASequence | |
| setModification(Size index, const String &modification) | AASequence | |
| setNTerminalModification(const String &modification) | AASequence | |
| setStringSequence(const String &sequence) | AASequence | |
| size() const | AASequence | |
| toString() const | AASequence | |
| toUnmodifiedString() const | AASequence | |
| valid_ | AASequence | protected |
| ~AASequence() | AASequence | virtual |
| OpenMS / TOPP release 1.11.1 | Documentation generated on Thu Nov 14 2013 11:19:27 using doxygen 1.8.5 |